Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 AC040160.2-201ENST00000623816 1675 ntBASIC14.98□□□□□ -0.01
LMO3Q8TAP4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 RN7SL67P-201ENST00000492147 296 ntBASIC14.98□□□□□ -0.01
LMO3Q8TAP4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 HPX-213ENST00000615166 826 ntTSL 5 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 DGCR9-201ENST00000609630 2415 ntBASIC14.98□□□□□ -0.01
LMO3Q8TAP4 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 FAM90A2P-201ENST00000511144 1395 ntBASIC14.98□□□□□ -0.01
LMO3Q8TAP4 FAM90A25P-201ENST00000528404 1395 ntBASIC14.98□□□□□ -0.01
LMO3Q8TAP4 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LMO3Q8TAP4 CICP8-201ENST00000455800 2813 ntBASIC14.98□□□□□ -0.01
LMO3Q8TAP4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 OR2I1P-209ENST00000641730 5365 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 Z97180.1-201ENST00000445173 988 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 FTH1P22-201ENST00000456305 520 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 RTN3P1-201ENST00000536295 711 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AC132825.4-202ENST00000578792 434 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 MIR4326-201ENST00000582203 59 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AL031673.1-201ENST00000611460 466 ntBASIC14.97□□□□□ -0.01
LMO3Q8TAP4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.97□□□□□ -0.01
LMO3Q8TAP4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 PDXDC2P-206ENST00000534700 1315 ntBASIC14.96□□□□□ -0.01
LMO3Q8TAP4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 NUTM2HP-201ENST00000442076 2498 ntBASIC14.96□□□□□ -0.01
LMO3Q8TAP4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.96□□□□□ -0.01
LMO3Q8TAP4 AP000358.1-201ENST00000456260 156 ntBASIC14.96□□□□□ -0.01
LMO3Q8TAP4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms