Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 NCLP1-201ENST00000445357 1963 ntBASIC15□□□□□ -0.01
CCDC50Q8IVM0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC50Q8IVM0 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC50Q8IVM0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 AC100850.1-201ENST00000506768 649 ntBASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 AP000812.2-201ENST00000538934 718 ntBASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 AC023310.1-201ENST00000554836 735 ntBASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC50Q8IVM0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 NME2P1-201ENST00000426182 414 ntBASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 ST13P19-201ENST00000442505 1124 ntBASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CCDC50Q8IVM0 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms