Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 DKKL1P1-201ENST00000400550 698 ntBASIC18.96■□□□□ 0.63
CGNL1Q0VF96 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 PSMD4P1-201ENST00000433951 1109 ntBASIC18.96■□□□□ 0.63
CGNL1Q0VF96 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 VENTXP3-201ENST00000546480 773 ntBASIC18.96■□□□□ 0.63
CGNL1Q0VF96 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 MIR5196-201ENST00000578146 115 ntBASIC18.96■□□□□ 0.63
CGNL1Q0VF96 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGNL1Q0VF96 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
CGNL1Q0VF96 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 MIR1227-201ENST00000408484 88 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 GCSHP3-201ENST00000431120 391 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 AC007279.1-201ENST00000448547 837 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 GNG10P1-201ENST00000452289 199 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 LINC00634-202ENST00000505157 222 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 C2orf69P1-201ENST00000563532 1093 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 KRT18P8-201ENST00000581937 1246 ntBASIC18.95■□□□□ 0.62
CGNL1Q0VF96 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGNL1Q0VF96 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 OR2I1P-209ENST00000641730 5365 ntBASIC18.94■□□□□ 0.62
CGNL1Q0VF96 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC084752.1-201ENST00000509766 622 ntBASIC18.94■□□□□ 0.62
CGNL1Q0VF96 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC100858.1-201ENST00000514059 1228 ntBASIC18.94■□□□□ 0.62
CGNL1Q0VF96 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 MIR4472-1-201ENST00000584349 80 ntBASIC18.94■□□□□ 0.62
CGNL1Q0VF96 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGNL1Q0VF96 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms