Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
IRX4P78413 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.81□□□□□ -0.04
IRX4P78413 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.81□□□□□ -0.04
IRX4P78413 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.81□□□□□ -0.04
IRX4P78413 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 AC087045.2-201ENST00000606279 1003 ntBASIC14.81□□□□□ -0.04
IRX4P78413 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 AL805961.1-201ENST00000642026 753 ntBASIC14.81□□□□□ -0.04
IRX4P78413 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
IRX4P78413 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.81□□□□□ -0.04
IRX4P78413 AC105206.1-202ENST00000314927 2368 ntBASIC14.81□□□□□ -0.04
IRX4P78413 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IRX4P78413 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 RN7SL832P-201ENST00000607781 1756 ntBASIC14.8□□□□□ -0.04
IRX4P78413 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
IRX4P78413 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IRX4P78413 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.8□□□□□ -0.04
IRX4P78413 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.8□□□□□ -0.04
IRX4P78413 RPSAP31-201ENST00000416648 895 ntBASIC14.8□□□□□ -0.04
IRX4P78413 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 AC073150.1-201ENST00000450406 1084 ntBASIC14.8□□□□□ -0.04
IRX4P78413 RN7SL8P-201ENST00000461771 266 ntBASIC14.8□□□□□ -0.04
IRX4P78413 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.8□□□□□ -0.04
IRX4P78413 AC026434.2-201ENST00000506094 1078 ntBASIC14.8□□□□□ -0.04
IRX4P78413 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 DUX4L47-201ENST00000566374 394 ntBASIC14.8□□□□□ -0.04
IRX4P78413 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.8□□□□□ -0.04
IRX4P78413 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.8□□□□□ -0.04
IRX4P78413 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
IRX4P78413 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.8□□□□□ -0.04
IRX4P78413 AC092171.5-201ENST00000608012 942 ntBASIC14.8□□□□□ -0.04
IRX4P78413 AC002472.3-201ENST00000640124 621 ntBASIC14.8□□□□□ -0.04
IRX4P78413 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IRX4P78413 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 TBC1D3J-201ENST00000620719 1426 ntBASIC14.8□□□□□ -0.04
IRX4P78413 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.8□□□□□ -0.04
IRX4P78413 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 MIR497HG-202ENST00000572453 3838 ntBASIC14.8□□□□□ -0.04
IRX4P78413 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.8□□□□□ -0.04
IRX4P78413 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.8□□□□□ -0.04
IRX4P78413 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IRX4P78413 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IRX4P78413 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms