Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MIR181D-201ENST00000384853 137 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 MIR193A-201ENST00000384882 88 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 CRIP1P2-201ENST00000425396 228 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 AC093700.1-201ENST00000503348 717 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 AC099343.1-201ENST00000513481 609 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 ABCD1P3-201ENST00000562927 605 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 AC091691.1-201ENST00000583587 1018 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC16.41■□□□□ 0.22
CNTNAP1P78357 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CNTNAP1P78357 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.41■□□□□ 0.22
CNTNAP1P78357 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 KF455155.1-201ENST00000604493 303 ntBASIC16.4■□□□□ 0.22
CNTNAP1P78357 BAP1-211ENST00000615113 489 ntBASIC16.4■□□□□ 0.22
CNTNAP1P78357 AC026120.2-201ENST00000617239 309 ntBASIC16.4■□□□□ 0.22
CNTNAP1P78357 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 CICP16-201ENST00000502609 2813 ntBASIC16.4■□□□□ 0.22
CNTNAP1P78357 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNTNAP1P78357 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.4■□□□□ 0.22
CNTNAP1P78357 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNTNAP1P78357 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CNTNAP1P78357 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 UGT1A12P-201ENST00000447084 853 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 AC079250.1-201ENST00000456046 531 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 VDAC1P11-201ENST00000458323 852 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 AC008620.2-201ENST00000510294 1569 ntBASIC16.39■□□□□ 0.21
CNTNAP1P78357 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNTNAP1P78357 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNTNAP1P78357 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms