Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRA2BP62995 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRA2BP62995 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRA2BP62995 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
TRA2BP62995 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRA2BP62995 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
TRA2BP62995 MIR1247-201ENST00000408206 136 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC13.27□□□□□ -0.29
TRA2BP62995 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.27□□□□□ -0.29
TRA2BP62995 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 AC007279.1-201ENST00000448547 837 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.27□□□□□ -0.29
TRA2BP62995 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRA2BP62995 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.27□□□□□ -0.29
TRA2BP62995 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.27□□□□□ -0.29
TRA2BP62995 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 PHBP15-201ENST00000574228 665 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 RN7SL774P-201ENST00000577467 290 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.27□□□□□ -0.29
TRA2BP62995 NDUFV2P1-201ENST00000596415 907 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.27□□□□□ -0.29
TRA2BP62995 MEG3_2.1-201ENST00000611456 105 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
TRA2BP62995 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRA2BP62995 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRA2BP62995 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.27□□□□□ -0.29
TRA2BP62995 Z98885.3-201ENST00000624882 1757 ntBASIC13.27□□□□□ -0.29
TRA2BP62995 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.27□□□□□ -0.29
TRA2BP62995 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRA2BP62995 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.26□□□□□ -0.29
TRA2BP62995 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TRA2BP62995 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.26□□□□□ -0.29
TRA2BP62995 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRA2BP62995 AC136604.1-202ENST00000425471 771 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.26□□□□□ -0.29
TRA2BP62995 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 RPSAP15-201ENST00000448168 861 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.26□□□□□ -0.29
TRA2BP62995 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 RN7SL258P-201ENST00000478664 300 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 KRT8P31-201ENST00000504812 1408 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC13.26□□□□□ -0.29
TRA2BP62995 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.26□□□□□ -0.29
TRA2BP62995 MSNP1-201ENST00000511640 1732 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRA2BP62995 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TRA2BP62995 AL161670.2-201ENST00000557650 1227 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 MIR4538-201ENST00000581377 78 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 ZNF493-208ENST00000599461 1769 ntBASIC13.26□□□□□ -0.29
TRA2BP62995 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.26□□□□□ -0.29
TRA2BP62995 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRA2BP62995 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TRA2BP62995 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRA2BP62995 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.26□□□□□ -0.29
TRA2BP62995 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRA2BP62995 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRA2BP62995 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRA2BP62995 AGAP12P-201ENST00000585227 2359 ntBASIC13.25□□□□□ -0.29
TRA2BP62995 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRA2BP62995 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRA2BP62995 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRA2BP62995 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.25□□□□□ -0.29
TRA2BP62995 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRA2BP62995 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.25□□□□□ -0.29
TRA2BP62995 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRA2BP62995 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRA2BP62995 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRA2BP62995 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRA2BP62995 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms