Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CLK1P49759 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.38□□□□□ -0.27
CLK1P49759 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.38□□□□□ -0.27
CLK1P49759 AC010336.1-201ENST00000539278 4739 ntBASIC13.38□□□□□ -0.27
CLK1P49759 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 AGAP10P-201ENST00000454844 2418 ntBASIC13.38□□□□□ -0.27
CLK1P49759 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.38□□□□□ -0.27
CLK1P49759 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 MIR1202-201ENST00000408529 83 ntBASIC13.38□□□□□ -0.27
CLK1P49759 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 PUDPP3-201ENST00000445368 636 ntBASIC13.38□□□□□ -0.27
CLK1P49759 AL035414.1-201ENST00000451327 857 ntBASIC13.38□□□□□ -0.27
CLK1P49759 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.38□□□□□ -0.27
CLK1P49759 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.38□□□□□ -0.27
CLK1P49759 AC002472.3-201ENST00000640124 621 ntBASIC13.38□□□□□ -0.27
CLK1P49759 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.38□□□□□ -0.27
CLK1P49759 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLK1P49759 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.38□□□□□ -0.27
CLK1P49759 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.37□□□□□ -0.27
CLK1P49759 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.37□□□□□ -0.27
CLK1P49759 HOMER2P2-201ENST00000451621 847 ntBASIC13.37□□□□□ -0.27
CLK1P49759 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.37□□□□□ -0.27
CLK1P49759 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.37□□□□□ -0.27
CLK1P49759 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.37□□□□□ -0.27
CLK1P49759 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.37□□□□□ -0.27
CLK1P49759 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 AP001002.3-201ENST00000623482 206 ntBASIC13.37□□□□□ -0.27
CLK1P49759 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CLK1P49759 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 AP002761.4-201ENST00000565433 3361 ntBASIC13.37□□□□□ -0.27
CLK1P49759 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLK1P49759 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLK1P49759 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLK1P49759 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms