Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATF3P18847 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.9■□□□□ 0.62
ATF3P18847 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.89■□□□□ 0.62
ATF3P18847 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
ATF3P18847 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATF3P18847 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.89■□□□□ 0.62
ATF3P18847 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC18.89■□□□□ 0.61
ATF3P18847 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC18.89■□□□□ 0.61
ATF3P18847 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 MKL1-204ENST00000402630 747 ntTSL 2 BASIC18.89■□□□□ 0.61
ATF3P18847 U3.41-201ENST00000408711 219 ntBASIC18.89■□□□□ 0.61
ATF3P18847 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC18.89■□□□□ 0.61
ATF3P18847 AC074019.1-201ENST00000428788 1096 ntBASIC18.89■□□□□ 0.61
ATF3P18847 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC18.89■□□□□ 0.61
ATF3P18847 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC18.89■□□□□ 0.61
ATF3P18847 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
ATF3P18847 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC18.89■□□□□ 0.61
ATF3P18847 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC18.89■□□□□ 0.61
ATF3P18847 RN7SL162P-201ENST00000579233 292 ntBASIC18.89■□□□□ 0.61
ATF3P18847 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC18.89■□□□□ 0.61
ATF3P18847 AC244097.1-201ENST00000621631 1216 ntBASIC18.89■□□□□ 0.61
ATF3P18847 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 AC008038.1-201ENST00000634247 1314 ntBASIC18.89■□□□□ 0.61
ATF3P18847 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC18.89■□□□□ 0.61
ATF3P18847 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ATF3P18847 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ATF3P18847 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATF3P18847 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.88■□□□□ 0.61
ATF3P18847 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATF3P18847 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 THAP4-203ENST00000402545 833 ntTSL 5 BASIC18.88■□□□□ 0.61
ATF3P18847 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.88■□□□□ 0.61
ATF3P18847 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ATF3P18847 IQCF4-203ENST00000428561 420 ntBASIC18.88■□□□□ 0.61
ATF3P18847 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC18.88■□□□□ 0.61
ATF3P18847 RN7SL47P-201ENST00000488710 299 ntBASIC18.88■□□□□ 0.61
ATF3P18847 AC114812.4-201ENST00000506676 757 ntBASIC18.88■□□□□ 0.61
ATF3P18847 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.88■□□□□ 0.61
ATF3P18847 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC18.88■□□□□ 0.61
ATF3P18847 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.88■□□□□ 0.61
ATF3P18847 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATF3P18847 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATF3P18847 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF3P18847 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.87■□□□□ 0.61
ATF3P18847 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATF3P18847 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATF3P18847 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATF3P18847 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF3P18847 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ATF3P18847 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC18.87■□□□□ 0.61
ATF3P18847 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC18.87■□□□□ 0.61
ATF3P18847 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC18.87■□□□□ 0.61
ATF3P18847 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC18.87■□□□□ 0.61
ATF3P18847 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
ATF3P18847 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF3P18847 RN7SL363P-201ENST00000482412 273 ntBASIC18.87■□□□□ 0.61
ATF3P18847 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF3P18847 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF3P18847 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.87■□□□□ 0.61
ATF3P18847 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATF3P18847 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.87■□□□□ 0.61
ATF3P18847 AC005332.2-201ENST00000590010 930 ntBASIC18.87■□□□□ 0.61
ATF3P18847 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.87■□□□□ 0.61
ATF3P18847 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms