Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ATF1P18846 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ATF1P18846 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.42□□□□□ -0.42
ATF1P18846 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.42□□□□□ -0.42
ATF1P18846 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.42□□□□□ -0.42
ATF1P18846 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 AL512384.1-201ENST00000406683 331 ntBASIC12.42□□□□□ -0.42
ATF1P18846 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.42□□□□□ -0.42
ATF1P18846 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
ATF1P18846 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.42□□□□□ -0.42
ATF1P18846 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
ATF1P18846 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.42□□□□□ -0.42
ATF1P18846 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.42□□□□□ -0.42
ATF1P18846 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.42□□□□□ -0.42
ATF1P18846 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.42□□□□□ -0.42
ATF1P18846 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.42□□□□□ -0.42
ATF1P18846 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.42□□□□□ -0.42
ATF1P18846 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.42□□□□□ -0.42
ATF1P18846 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
ATF1P18846 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.42□□□□□ -0.42
ATF1P18846 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.42□□□□□ -0.42
ATF1P18846 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 AL021155.1-201ENST00000438808 2637 ntBASIC12.42□□□□□ -0.42
ATF1P18846 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.42□□□□□ -0.42
ATF1P18846 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 AC107375.1-201ENST00000564464 2231 ntBASIC12.42□□□□□ -0.42
ATF1P18846 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ATF1P18846 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
ATF1P18846 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 TMBIM7P-202ENST00000641474 1516 ntBASIC12.42□□□□□ -0.42
ATF1P18846 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ATF1P18846 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 RN7SL692P-201ENST00000464677 288 ntBASIC12.41□□□□□ -0.42
ATF1P18846 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 C2orf69P2-201ENST00000562032 1123 ntBASIC12.41□□□□□ -0.42
ATF1P18846 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.41□□□□□ -0.42
ATF1P18846 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 AC021016.3-201ENST00000608367 477 ntBASIC12.41□□□□□ -0.42
ATF1P18846 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.41□□□□□ -0.42
ATF1P18846 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.41□□□□□ -0.42
ATF1P18846 AL591163.1-201ENST00000641757 987 ntBASIC12.41□□□□□ -0.42
ATF1P18846 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ATF1P18846 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms