Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MIR193BHG-211ENST00000641433 5365 ntBASIC14.28□□□□□ -0.12
VCLP18206 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.28□□□□□ -0.12
VCLP18206 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VCLP18206 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
VCLP18206 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.27□□□□□ -0.12
VCLP18206 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.27□□□□□ -0.12
VCLP18206 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.27□□□□□ -0.12
VCLP18206 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
VCLP18206 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.27□□□□□ -0.12
VCLP18206 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VCLP18206 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VCLP18206 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
VCLP18206 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 AL161932.2-201ENST00000435436 679 ntBASIC14.27□□□□□ -0.13
VCLP18206 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 AC090857.1-201ENST00000527400 390 ntBASIC14.27□□□□□ -0.13
VCLP18206 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.27□□□□□ -0.13
VCLP18206 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.27□□□□□ -0.13
VCLP18206 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.27□□□□□ -0.13
VCLP18206 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.27□□□□□ -0.13
VCLP18206 AC124068.2-201ENST00000569473 1109 ntBASIC14.27□□□□□ -0.13
VCLP18206 AC021016.3-201ENST00000608367 477 ntBASIC14.27□□□□□ -0.13
VCLP18206 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.27□□□□□ -0.13
VCLP18206 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.27□□□□□ -0.13
VCLP18206 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VCLP18206 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.27□□□□□ -0.13
VCLP18206 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VCLP18206 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 AL157791.1-201ENST00000553667 1699 ntBASIC14.26□□□□□ -0.13
VCLP18206 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
VCLP18206 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VCLP18206 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.26□□□□□ -0.13
VCLP18206 Z97180.1-201ENST00000445173 988 ntBASIC14.26□□□□□ -0.13
VCLP18206 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.26□□□□□ -0.13
VCLP18206 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.26□□□□□ -0.13
VCLP18206 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.26□□□□□ -0.13
VCLP18206 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.26□□□□□ -0.13
VCLP18206 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.26□□□□□ -0.13
VCLP18206 AL645939.5-201ENST00000606834 243 ntBASIC14.26□□□□□ -0.13
VCLP18206 AL591471.1-201ENST00000621855 229 ntBASIC14.26□□□□□ -0.13
VCLP18206 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
VCLP18206 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.26□□□□□ -0.13
VCLP18206 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VCLP18206 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
VCLP18206 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms