Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TOP1P11387 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 AC006480.2-201ENST00000609770 1337 ntBASIC16.57■□□□□ 0.24
TOP1P11387 AP000356.3-201ENST00000382243 753 ntBASIC16.57■□□□□ 0.24
TOP1P11387 AL512430.1-201ENST00000392575 860 ntBASIC16.57■□□□□ 0.24
TOP1P11387 AL627422.1-201ENST00000434104 580 ntBASIC16.57■□□□□ 0.24
TOP1P11387 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 NOC2LP1-201ENST00000450578 752 ntBASIC16.57■□□□□ 0.24
TOP1P11387 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.57■□□□□ 0.24
TOP1P11387 CHCHD2P9-201ENST00000461726 456 ntBASIC16.57■□□□□ 0.24
TOP1P11387 AC130709.1-201ENST00000484779 1212 ntBASIC16.57■□□□□ 0.24
TOP1P11387 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.57■□□□□ 0.24
TOP1P11387 RN7SL665P-201ENST00000578793 300 ntBASIC16.57■□□□□ 0.24
TOP1P11387 RN7SL455P-201ENST00000580629 282 ntBASIC16.57■□□□□ 0.24
TOP1P11387 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.57■□□□□ 0.24
TOP1P11387 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.57■□□□□ 0.24
TOP1P11387 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 AC107918.4-201ENST00000641966 3141 ntBASIC16.57■□□□□ 0.24
TOP1P11387 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.57■□□□□ 0.24
TOP1P11387 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TOP1P11387 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC16.57■□□□□ 0.24
TOP1P11387 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 AC074138.1-201ENST00000611182 1303 ntBASIC16.56■□□□□ 0.24
TOP1P11387 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.56■□□□□ 0.24
TOP1P11387 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.56■□□□□ 0.24
TOP1P11387 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TOP1P11387 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TOP1P11387 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
TOP1P11387 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 AC138969.2-201ENST00000532739 9932 ntBASIC16.56■□□□□ 0.24
TOP1P11387 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TOP1P11387 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TOP1P11387 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TOP1P11387 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.55■□□□□ 0.24
TOP1P11387 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC16.55■□□□□ 0.24
TOP1P11387 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms