Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSBP07858 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSBP07858 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 AL357563.1-201ENST00000404728 395 ntBASIC13.26□□□□□ -0.29
CTSBP07858 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.26□□□□□ -0.29
CTSBP07858 AC108734.2-201ENST00000420887 1069 ntBASIC13.26□□□□□ -0.29
CTSBP07858 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSBP07858 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 AC253536.4-201ENST00000440539 267 ntBASIC13.26□□□□□ -0.29
CTSBP07858 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSBP07858 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSBP07858 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSBP07858 PRSS3P1-201ENST00000503996 742 ntBASIC13.26□□□□□ -0.29
CTSBP07858 EEF1GP8-201ENST00000506566 1154 ntBASIC13.26□□□□□ -0.29
CTSBP07858 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSBP07858 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.26□□□□□ -0.29
CTSBP07858 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 AC025183.3-201ENST00000623526 1482 ntBASIC13.26□□□□□ -0.29
CTSBP07858 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CTSBP07858 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CTSBP07858 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CTSBP07858 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 AC023794.5-201ENST00000564380 2157 ntBASIC13.25□□□□□ -0.29
CTSBP07858 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSBP07858 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CTSBP07858 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
CTSBP07858 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CTSBP07858 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 IGHV3-37-201ENST00000518544 340 ntBASIC13.25□□□□□ -0.29
CTSBP07858 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 AP003398.1-201ENST00000531124 318 ntBASIC13.25□□□□□ -0.29
CTSBP07858 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 SNORD3B-1-201ENST00000577988 758 ntBASIC13.25□□□□□ -0.29
CTSBP07858 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.25□□□□□ -0.29
CTSBP07858 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 AL009176.1-201ENST00000607876 650 ntBASIC13.25□□□□□ -0.29
CTSBP07858 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CTSBP07858 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSBP07858 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.25□□□□□ -0.29
CTSBP07858 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CTSBP07858 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CTSBP07858 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms