Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.89□□□□□ -0.03
TIMP1P01033 CRIP1P2-201ENST00000425396 228 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 RFNG-202ENST00000429557 994 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMP1P01033 AC093106.1-201ENST00000437271 352 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC14.89□□□□□ -0.03
TIMP1P01033 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.89□□□□□ -0.03
TIMP1P01033 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.89□□□□□ -0.03
TIMP1P01033 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TIMP1P01033 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TIMP1P01033 AC138627.1-201ENST00000641127 1257 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TIMP1P01033 AC023157.3-201ENST00000619086 2088 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
TIMP1P01033 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.89□□□□□ -0.03
TIMP1P01033 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMP1P01033 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TIMP1P01033 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 AC089987.1-201ENST00000551654 2209 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TIMP1P01033 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMP1P01033 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TIMP1P01033 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TIMP1P01033 KRT8P6-201ENST00000399259 1207 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.88□□□□□ -0.03
TIMP1P01033 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMP1P01033 HMGA1P2-201ENST00000430198 324 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TIMP1P01033 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 POLR2LP1-206ENST00000444785 187 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 RN7SL794P-201ENST00000469816 280 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 MIR3940-201ENST00000579148 102 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 RN7SL162P-201ENST00000579233 292 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMP1P01033 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 AC112220.4-201ENST00000604982 1263 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMP1P01033 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 SFPQP1-201ENST00000446621 1786 ntBASIC14.88□□□□□ -0.03
TIMP1P01033 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMP1P01033 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMP1P01033 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TIMP1P01033 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TIMP1P01033 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 AC093462.1-201ENST00000621167 1683 ntBASIC14.87□□□□□ -0.03
TIMP1P01033 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TIMP1P01033 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TIMP1P01033 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.87□□□□□ -0.03
TIMP1P01033 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms