Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RNF7-202ENST00000393000 805 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SNORA50D-201ENST00000408059 134 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 MRPS16P3-201ENST00000415961 374 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 ATP5G1P7-201ENST00000444398 400 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM88BA6NKF7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 CA6-205ENST00000480186 1493 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 PHBP3-201ENST00000412562 819 ntBASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 PRDX3P2-201ENST00000447051 611 ntBASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 AC112702.1-201ENST00000623712 366 ntBASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 AC002511.3-201ENST00000638098 420 ntBASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM88BA6NKF7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 FCRLA-202ENST00000294796 766 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 RNA5SP84-201ENST00000364740 107 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 MARCKSL1P2-201ENST00000401037 976 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 PGAM1P10-201ENST00000402426 761 ntBASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMEM88BA6NKF7 AC090616.6-202ENST00000583601 1088 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms