Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 AL139158.3-201ENST00000641212 1562 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 GEMIN8P4-201ENST00000380526 729 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 AF274858.1-201ENST00000406288 372 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 TPT1P11-201ENST00000458482 498 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 MT3-202ENST00000561640 514 ntTSL 3 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 AL049840.2-201ENST00000602722 535 ntBASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.3□□□□□ -0.28
CCDC187A0A096LP49 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC007686.3-201ENST00000619017 3487 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 USP17L6P-201ENST00000382470 1197 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 MIR1307-201ENST00000408840 149 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 RN7SL351P-201ENST00000469306 248 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 KNOP1P1-201ENST00000542108 989 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AL136982.5-201ENST00000605222 294 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC148477.9-201ENST00000623974 539 ntBASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCDC187A0A096LP49 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 766.2 ms