Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 RN7SKP175-201ENST00000408472 289 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AL359711.2-201ENST00000563105 872 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AL671883.3-201ENST00000603274 991 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AC002472.3-201ENST00000640124 621 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 AP000593.2-201ENST00000542775 1433 ntBASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
RCL1Q9Y2P8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
RCL1Q9Y2P8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RCL1Q9Y2P8 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
RCL1Q9Y2P8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.58□□□□□ -0.55
RCL1Q9Y2P8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.58□□□□□ -0.55
RCL1Q9Y2P8 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC131902.2-201ENST00000566892 2172 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC025183.3-201ENST00000623526 1482 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 TRIM80P-201ENST00000455685 2848 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 RPSAP43-201ENST00000402237 625 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 TSEN15P1-201ENST00000423257 515 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 FTLP10-202ENST00000505798 471 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC104596.2-201ENST00000512793 793 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 IGHV3-42-201ENST00000520410 361 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 AC009955.4-201ENST00000597192 544 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 MIR8072-201ENST00000614241 80 ntBASIC11.58□□□□□ -0.56
RCL1Q9Y2P8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms