Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 HSPB1P2-201ENST00000448722 546 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 RIT1-205ENST00000539040 919 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AL583810.1-201ENST00000553344 1045 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC007663.3-201ENST00000609632 465 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC091271.1-201ENST00000611877 1162 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC133540.1-201ENST00000620845 1019 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 RPL35-206ENST00000629845 340 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 AC136759.1-202ENST00000530858 2194 ntBASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LINC00474Q9P2X8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
LINC00474Q9P2X8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms