Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 RN7SL219P-201ENST00000582872 296 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AL451050.2-201ENST00000606967 682 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 AL022328.3-201ENST00000607943 679 ntBASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NUP43Q8NFH3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 RNA5SP359-201ENST00000364838 113 ntBASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.22□□□□□ -0.29
NUP43Q8NFH3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 RPS9P1-201ENST00000419943 583 ntBASIC13.22□□□□□ -0.29
NUP43Q8NFH3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AC108725.1-201ENST00000495472 409 ntBASIC13.22□□□□□ -0.29
NUP43Q8NFH3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 AC135782.3-201ENST00000562782 2105 ntBASIC13.22□□□□□ -0.29
NUP43Q8NFH3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NUP43Q8NFH3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 MIR497HG-202ENST00000572453 3838 ntBASIC13.21□□□□□ -0.29
NUP43Q8NFH3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NUP43Q8NFH3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms