Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 JPT1-205ENST00000470924 663 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 RN7SL452P-201ENST00000482923 291 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 RN7SL2-201ENST00000490232 300 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AC090825.2-201ENST00000557959 739 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 RN7SL4P-201ENST00000584058 295 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AC022382.1-201ENST00000602768 336 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AL109954.3-201ENST00000615088 558 ntBASIC13.4□□□□□ -0.26
RIF1Q5UIP0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AC018529.2-202ENST00000611482 3087 ntBASIC13.4□□□□□ -0.26
RIF1Q5UIP0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 RBMXP1-201ENST00000408004 1191 ntBASIC13.4□□□□□ -0.26
RIF1Q5UIP0 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 RPSAP61-201ENST00000412542 878 ntBASIC13.4□□□□□ -0.26
RIF1Q5UIP0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AC026271.1-201ENST00000447794 1348 ntBASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 AC022296.3-201ENST00000608823 403 ntBASIC13.4□□□□□ -0.26
RIF1Q5UIP0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RIF1Q5UIP0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RIF1Q5UIP0 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
RIF1Q5UIP0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RIF1Q5UIP0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
RIF1Q5UIP0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
RIF1Q5UIP0 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RIF1Q5UIP0 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms