Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 LINC02084-201ENST00000606069 1096 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC093726.1-201ENST00000608064 963 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC022400.8-201ENST00000623453 3599 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 RCC2P1-201ENST00000452257 1476 ntBASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
ANKRD55Q3KP44 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC131902.2-201ENST00000566892 2172 ntBASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC008620.2-201ENST00000510294 1569 ntBASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 AC110048.1-201ENST00000604293 2157 ntBASIC11.77□□□□□ -0.53
ANKRD55Q3KP44 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 ACKR1-201ENST00000368121 1240 ntBASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ANKRD55Q3KP44 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms