Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.94□□□□□ -0.18
CDKL1Q00532 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 FAM8A2P-201ENST00000528813 1142 ntBASIC13.94□□□□□ -0.18
CDKL1Q00532 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.94□□□□□ -0.18
CDKL1Q00532 AC005695.3-201ENST00000614522 232 ntBASIC13.94□□□□□ -0.18
CDKL1Q00532 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.94□□□□□ -0.18
CDKL1Q00532 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.94□□□□□ -0.18
CDKL1Q00532 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.94□□□□□ -0.18
CDKL1Q00532 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDKL1Q00532 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CDKL1Q00532 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKL1Q00532 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKL1Q00532 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CDKL1Q00532 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKL1Q00532 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.93□□□□□ -0.18
CDKL1Q00532 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.93□□□□□ -0.18
CDKL1Q00532 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.93□□□□□ -0.18
CDKL1Q00532 SNORD3B-2-202ENST00000571722 791 ntBASIC13.93□□□□□ -0.18
CDKL1Q00532 AC104982.3-201ENST00000581995 514 ntBASIC13.93□□□□□ -0.18
CDKL1Q00532 AC239800.4-201ENST00000603712 296 ntBASIC13.93□□□□□ -0.18
CDKL1Q00532 AC090164.2-201ENST00000611487 516 ntBASIC13.93□□□□□ -0.18
CDKL1Q00532 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKL1Q00532 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKL1Q00532 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKL1Q00532 NCLP1-201ENST00000445357 1963 ntBASIC13.92□□□□□ -0.18
CDKL1Q00532 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKL1Q00532 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CDKL1Q00532 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CDKL1Q00532 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CDKL1Q00532 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKL1Q00532 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKL1Q00532 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms