Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN6P56747 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 BX679664.3-201ENST00000414070 555 ntBASIC13.51□□□□□ -0.25
CLDN6P56747 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 AC113935.1-201ENST00000471722 555 ntBASIC13.51□□□□□ -0.25
CLDN6P56747 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC13.51□□□□□ -0.25
CLDN6P56747 PRSS3P1-201ENST00000503996 742 ntBASIC13.51□□□□□ -0.25
CLDN6P56747 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN6P56747 AL009176.1-201ENST00000607876 650 ntBASIC13.51□□□□□ -0.25
CLDN6P56747 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.51□□□□□ -0.25
CLDN6P56747 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN6P56747 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN6P56747 AP000769.1-203ENST00000637245 208 ntBASIC13.51□□□□□ -0.25
CLDN6P56747 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN6P56747 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN6P56747 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN6P56747 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLDN6P56747 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLDN6P56747 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLDN6P56747 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDN6P56747 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDN6P56747 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN6P56747 GEMIN8P4-201ENST00000380526 729 ntBASIC13.5□□□□□ -0.25
CLDN6P56747 PPP1R2P4-201ENST00000424051 595 ntBASIC13.5□□□□□ -0.25
CLDN6P56747 IFNWP2-201ENST00000431203 580 ntBASIC13.5□□□□□ -0.25
CLDN6P56747 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLDN6P56747 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDN6P56747 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC13.5□□□□□ -0.25
CLDN6P56747 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
CLDN6P56747 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN6P56747 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN6P56747 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.5□□□□□ -0.25
CLDN6P56747 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN6P56747 AL031673.1-201ENST00000611460 466 ntBASIC13.5□□□□□ -0.25
CLDN6P56747 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN6P56747 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN6P56747 AC007686.3-201ENST00000619017 3487 ntBASIC13.49□□□□□ -0.25
CLDN6P56747 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDN6P56747 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDN6P56747 KRT8P43-201ENST00000406052 1458 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms