Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3AP56704 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.25□□□□□ -0.13
WNT3AP56704 POU5F1P2-201ENST00000521750 823 ntBASIC14.25□□□□□ -0.13
WNT3AP56704 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 AL021707.6-201ENST00000609212 491 ntBASIC14.25□□□□□ -0.13
WNT3AP56704 AC244093.1-201ENST00000610837 814 ntBASIC14.25□□□□□ -0.13
WNT3AP56704 MIR6769A-201ENST00000617340 73 ntBASIC14.25□□□□□ -0.13
WNT3AP56704 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
WNT3AP56704 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.25□□□□□ -0.13
WNT3AP56704 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
WNT3AP56704 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.25□□□□□ -0.13
WNT3AP56704 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
WNT3AP56704 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
WNT3AP56704 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.24□□□□□ -0.13
WNT3AP56704 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 BANF1P3-201ENST00000412556 261 ntBASIC14.24□□□□□ -0.13
WNT3AP56704 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.24□□□□□ -0.13
WNT3AP56704 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 AC073150.1-201ENST00000450406 1084 ntBASIC14.24□□□□□ -0.13
WNT3AP56704 RN7SL11P-201ENST00000471305 293 ntBASIC14.24□□□□□ -0.13
WNT3AP56704 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.24□□□□□ -0.13
WNT3AP56704 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.24□□□□□ -0.13
WNT3AP56704 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.24□□□□□ -0.13
WNT3AP56704 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.24□□□□□ -0.13
WNT3AP56704 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
WNT3AP56704 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.24□□□□□ -0.13
WNT3AP56704 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms