Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 HIST2H2BA-201ENST00000412169 381 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 ERP29P1-201ENST00000442902 706 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 MPRIPP1-201ENST00000452433 1089 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.18□□□□□ -0.3
EFNA3P52797 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 AP000911.2-201ENST00000534330 502 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 AC107464.3-201ENST00000609172 737 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 AGAP10P-201ENST00000454844 2418 ntBASIC13.18□□□□□ -0.3
EFNA3P52797 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.17□□□□□ -0.3
EFNA3P52797 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNA3P52797 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.17□□□□□ -0.3
EFNA3P52797 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.17□□□□□ -0.3
EFNA3P52797 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNA3P52797 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNA3P52797 SCARNA12-201ENST00000459155 270 ntBASIC13.17□□□□□ -0.3
EFNA3P52797 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNA3P52797 AC008267.1-201ENST00000474858 1069 ntBASIC13.17□□□□□ -0.3
EFNA3P52797 RN7SL564P-201ENST00000496309 250 ntBASIC13.17□□□□□ -0.3
EFNA3P52797 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNA3P52797 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.17□□□□□ -0.3
EFNA3P52797 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.17□□□□□ -0.3
EFNA3P52797 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 U62317.3-201ENST00000608319 855 ntBASIC13.17□□□□□ -0.3
EFNA3P52797 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.17□□□□□ -0.3
EFNA3P52797 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
EFNA3P52797 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.17□□□□□ -0.3
EFNA3P52797 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms