Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.92□□□□□ -0.02
BRCC3P46736 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 TCAM1P-207ENST00000485295 1537 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
BRCC3P46736 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 AL928654.5-201ENST00000624831 2501 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.92□□□□□ -0.02
BRCC3P46736 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 ACTG1P19-201ENST00000418987 1116 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 EEF1DP2-201ENST00000433698 843 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 AC093826.1-201ENST00000508655 993 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 AC100858.1-201ENST00000514059 1228 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.92□□□□□ -0.02
BRCC3P46736 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC14.92□□□□□ -0.02
BRCC3P46736 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.92□□□□□ -0.02
BRCC3P46736 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
BRCC3P46736 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
BRCC3P46736 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCC3P46736 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
BRCC3P46736 AC117503.4-201ENST00000623229 1418 ntBASIC14.92□□□□□ -0.02
BRCC3P46736 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 AC008620.2-201ENST00000510294 1569 ntBASIC14.91□□□□□ -0.02
BRCC3P46736 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 OR7E115P-201ENST00000382617 1024 ntBASIC14.91□□□□□ -0.02
BRCC3P46736 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
BRCC3P46736 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
BRCC3P46736 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 GNG10P1-201ENST00000452289 199 ntBASIC14.91□□□□□ -0.02
BRCC3P46736 AC025186.1-201ENST00000478174 870 ntBASIC14.91□□□□□ -0.02
BRCC3P46736 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 AC093909.3-201ENST00000504783 336 ntBASIC14.91□□□□□ -0.02
BRCC3P46736 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.91□□□□□ -0.02
BRCC3P46736 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.91□□□□□ -0.02
BRCC3P46736 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.91□□□□□ -0.02
BRCC3P46736 AC006158.1-201ENST00000610661 249 ntBASIC14.91□□□□□ -0.02
BRCC3P46736 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCC3P46736 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.91□□□□□ -0.02
BRCC3P46736 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.91□□□□□ -0.02
BRCC3P46736 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.91□□□□□ -0.02
BRCC3P46736 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCC3P46736 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
BRCC3P46736 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms