Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
PRKCAP17252 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 AC134407.3-201ENST00000624035 2139 ntBASIC13.19□□□□□ -0.3
PRKCAP17252 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.19□□□□□ -0.3
PRKCAP17252 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
PRKCAP17252 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PRKCAP17252 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.19□□□□□ -0.3
PRKCAP17252 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PRKCAP17252 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.19□□□□□ -0.3
PRKCAP17252 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 PCDHB18P-202ENST00000526308 3197 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PRKCAP17252 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.18□□□□□ -0.3
PRKCAP17252 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
PRKCAP17252 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 ST13P19-201ENST00000442505 1124 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 RPL18P13-201ENST00000478088 569 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.18□□□□□ -0.3
PRKCAP17252 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.18□□□□□ -0.3
PRKCAP17252 BNIP3P13-201ENST00000599968 566 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 AC133540.1-201ENST00000620845 1019 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 AC022748.3-201ENST00000621828 275 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 CYP4F23P-201ENST00000593402 1579 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.18□□□□□ -0.3
PRKCAP17252 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 AC018735.1-201ENST00000437208 1502 ntBASIC13.18□□□□□ -0.3
PRKCAP17252 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PRKCAP17252 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PRKCAP17252 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PRKCAP17252 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.17□□□□□ -0.3
PRKCAP17252 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
PRKCAP17252 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.17□□□□□ -0.3
PRKCAP17252 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
PRKCAP17252 AC004899.1-201ENST00000424687 1714 ntBASIC13.17□□□□□ -0.3
PRKCAP17252 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PRKCAP17252 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms