Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
APOA4P06727 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.21□□□□□ -0.14
APOA4P06727 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA4P06727 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
APOA4P06727 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
APOA4P06727 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
APOA4P06727 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 LINC02486-201ENST00000604157 3000 ntBASIC14.2□□□□□ -0.14
APOA4P06727 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOA4P06727 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.2□□□□□ -0.14
APOA4P06727 AC136604.1-202ENST00000425471 771 ntBASIC14.2□□□□□ -0.14
APOA4P06727 ACTBP11-201ENST00000436287 1126 ntBASIC14.2□□□□□ -0.14
APOA4P06727 AC244107.1-201ENST00000442033 332 ntBASIC14.2□□□□□ -0.14
APOA4P06727 SERPINA13P-202ENST00000478994 924 ntBASIC14.2□□□□□ -0.14
APOA4P06727 HLA-J-204ENST00000495278 958 ntBASIC14.2□□□□□ -0.14
APOA4P06727 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.2□□□□□ -0.14
APOA4P06727 AC005740.2-201ENST00000511085 419 ntBASIC14.2□□□□□ -0.14
APOA4P06727 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.2□□□□□ -0.14
APOA4P06727 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
APOA4P06727 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.2□□□□□ -0.14
APOA4P06727 PGAM1P5-201ENST00000548011 764 ntBASIC14.2□□□□□ -0.14
APOA4P06727 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
APOA4P06727 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 AC140658.4-201ENST00000561990 352 ntBASIC14.2□□□□□ -0.14
APOA4P06727 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.2□□□□□ -0.14
APOA4P06727 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.2□□□□□ -0.14
APOA4P06727 AC090164.2-201ENST00000611487 516 ntBASIC14.2□□□□□ -0.14
APOA4P06727 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 NUTM2HP-201ENST00000442076 2498 ntBASIC14.2□□□□□ -0.14
APOA4P06727 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 FAM90A7P-201ENST00000382628 1395 ntBASIC14.2□□□□□ -0.14
APOA4P06727 FAM90A23P-201ENST00000400136 1395 ntBASIC14.2□□□□□ -0.14
APOA4P06727 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA4P06727 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA4P06727 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA4P06727 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APOA4P06727 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
APOA4P06727 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA4P06727 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA4P06727 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOA4P06727 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA4P06727 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms