Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.89□□□□□ -0.51
CD74P04233 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.89□□□□□ -0.51
CD74P04233 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
CD74P04233 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.89□□□□□ -0.51
CD74P04233 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.89□□□□□ -0.51
CD74P04233 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CD74P04233 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
CD74P04233 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
CD74P04233 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CD74P04233 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.88□□□□□ -0.51
CD74P04233 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC11.88□□□□□ -0.51
CD74P04233 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 TPM3P8-201ENST00000330554 643 ntBASIC11.88□□□□□ -0.51
CD74P04233 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.88□□□□□ -0.51
CD74P04233 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 AC010141.1-201ENST00000411585 623 ntBASIC11.88□□□□□ -0.51
CD74P04233 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.88□□□□□ -0.51
CD74P04233 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.88□□□□□ -0.51
CD74P04233 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 ANKRD30BP2-201ENST00000435744 1610 ntBASIC11.88□□□□□ -0.51
CD74P04233 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
CD74P04233 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.88□□□□□ -0.51
CD74P04233 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC11.88□□□□□ -0.51
CD74P04233 AL031432.4-201ENST00000641729 2190 ntBASIC11.88□□□□□ -0.51
CD74P04233 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.88□□□□□ -0.51
CD74P04233 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CD74P04233 PCDHB17P-202ENST00000623466 3066 ntBASIC11.88□□□□□ -0.51
CD74P04233 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.87□□□□□ -0.51
CD74P04233 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC11.87□□□□□ -0.51
CD74P04233 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.87□□□□□ -0.51
CD74P04233 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CD74P04233 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms