Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.2□□□□□ -0.62
IFNA1P01562 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.2□□□□□ -0.62
IFNA1P01562 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.2□□□□□ -0.62
IFNA1P01562 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.2□□□□□ -0.62
IFNA1P01562 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 GIMAP3P-201ENST00000495150 836 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 AC138761.1-201ENST00000584393 385 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 AC093813.1-201ENST00000605066 256 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 AL109936.8-201ENST00000641772 604 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 AC092865.6-201ENST00000642101 219 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 SALL4P6-201ENST00000429385 1691 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.2□□□□□ -0.62
IFNA1P01562 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
IFNA1P01562 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.2□□□□□ -0.62
IFNA1P01562 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
IFNA1P01562 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 FLJ30679-201ENST00000624773 1980 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 AC025183.3-201ENST00000623526 1482 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 SSR4P1-201ENST00000415143 412 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 AC079781.3-201ENST00000449110 356 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 INE1-201ENST00000456273 945 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.19□□□□□ -0.62
IFNA1P01562 AC026410.3-201ENST00000514280 936 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.19□□□□□ -0.62
IFNA1P01562 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 AC145285.3-201ENST00000564603 959 ntBASIC11.19□□□□□ -0.62
IFNA1P01562 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.19□□□□□ -0.62
IFNA1P01562 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC11.19□□□□□ -0.62
IFNA1P01562 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
IFNA1P01562 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms