Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHL1O00533 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHL1O00533 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.88■□□□□ 0.45
CHL1O00533 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHL1O00533 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CHL1O00533 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHL1O00533 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC17.88■□□□□ 0.45
CHL1O00533 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.88■□□□□ 0.45
CHL1O00533 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC17.88■□□□□ 0.45
CHL1O00533 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHL1O00533 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.88■□□□□ 0.45
CHL1O00533 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 ABCD1P2-201ENST00000429313 1601 ntBASIC17.87■□□□□ 0.45
CHL1O00533 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 CR383656.2-201ENST00000548656 2254 ntBASIC17.87■□□□□ 0.45
CHL1O00533 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 AC005840.4-201ENST00000541242 2494 ntBASIC17.87■□□□□ 0.45
CHL1O00533 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 ACTBP14-201ENST00000411655 1089 ntBASIC17.87■□□□□ 0.45
CHL1O00533 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 HNRNPA1P2-207ENST00000432375 960 ntBASIC17.87■□□□□ 0.45
CHL1O00533 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.87■□□□□ 0.45
CHL1O00533 AC005077.3-201ENST00000449614 213 ntBASIC17.87■□□□□ 0.45
CHL1O00533 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 JPT2-214ENST00000569765 782 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 MIR4750-201ENST00000584564 56 ntBASIC17.87■□□□□ 0.45
CHL1O00533 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHL1O00533 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.87■□□□□ 0.45
CHL1O00533 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC17.87■□□□□ 0.45
CHL1O00533 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.86■□□□□ 0.45
CHL1O00533 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 AC084752.1-201ENST00000509766 622 ntBASIC17.86■□□□□ 0.45
CHL1O00533 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.86■□□□□ 0.45
CHL1O00533 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.86■□□□□ 0.45
CHL1O00533 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC17.86■□□□□ 0.45
CHL1O00533 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.86■□□□□ 0.45
CHL1O00533 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHL1O00533 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.86■□□□□ 0.45
CHL1O00533 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 AL365181.1-201ENST00000564032 1828 ntBASIC17.86■□□□□ 0.45
CHL1O00533 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC17.86■□□□□ 0.45
CHL1O00533 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CHL1O00533 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.86■□□□□ 0.45
CHL1O00533 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHL1O00533 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms