Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL4A3BPQ9Y5P4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 RPL13AP3-202ENST00000494676 1473 ntBASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 AC051619.9-201ENST00000623237 597 ntBASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 FAM90A12P-201ENST00000519497 2375 ntBASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 FAM90A24P-201ENST00000520792 2369 ntBASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL4A3BPQ9Y5P4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 OR8T1P-201ENST00000421347 918 ntBASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AL807761.2-201ENST00000422849 729 ntBASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 SIGLEC18P-201ENST00000602271 909 ntBASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AC007326.1-201ENST00000604539 458 ntBASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 AC103691.2-201ENST00000618824 433 ntBASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL4A3BPQ9Y5P4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms