Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTDP1Q9Y5B0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 BAK1P1-201ENST00000317045 636 ntBASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 LINC00265-2P-201ENST00000413372 782 ntBASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 KLF17P1-201ENST00000547105 1126 ntBASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
CTDP1Q9Y5B0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 LINC00244-201ENST00000625073 613 ntBASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.32■□□□□ 0.2
CTDP1Q9Y5B0 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AL022313.4-201ENST00000562756 2046 ntBASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 IL9RP3-201ENST00000442856 1674 ntBASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 CICP24-201ENST00000605464 2705 ntBASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 RN7SL788P-201ENST00000460504 316 ntBASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 RN7SL564P-201ENST00000496309 250 ntBASIC16.31■□□□□ 0.2
CTDP1Q9Y5B0 AC095040.1-201ENST00000513286 675 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms