Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC136604.1-202ENST00000425471 771 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 CNN2P10-201ENST00000443067 918 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC124068.2-201ENST00000569473 1109 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 MIR4783-201ENST00000580343 82 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 CR392039.2-201ENST00000623182 509 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AL645937.6-201ENST00000641122 3727 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 AP000437.1-201ENST00000624057 2085 ntBASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.98□□□□□ -0.49
HDHD3Q9BSH5 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AC108024.1-201ENST00000626286 1721 ntBASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 CR383656.2-201ENST00000548656 2254 ntBASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AHCYP2-201ENST00000430630 1300 ntBASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 HMGA1P1-201ENST00000415560 1062 ntBASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.97□□□□□ -0.49
HDHD3Q9BSH5 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms