Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 SCARNA12-201ENST00000459155 270 ntBASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 AC145285.5-201ENST00000562217 361 ntBASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.77■□□□□ 0.12
ATP6V0A1Q93050 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 AC004554.1-201ENST00000422830 1468 ntBASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ATP6V0A1Q93050 AC068760.1-201ENST00000493579 1953 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AL357563.1-201ENST00000404728 395 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AL157792.1-201ENST00000488281 530 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC095040.1-201ENST00000513286 675 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC068867.1-201ENST00000559855 150 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 RN7SL357P-201ENST00000581065 298 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC127024.7-201ENST00000625101 200 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 AC005089.1-201ENST00000619486 2241 ntBASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.76■□□□□ 0.11
ATP6V0A1Q93050 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ATP6V0A1Q93050 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP6V0A1Q93050 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP6V0A1Q93050 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP6V0A1Q93050 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.75■□□□□ 0.11
ATP6V0A1Q93050 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
ATP6V0A1Q93050 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms