Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 GUSBP10-201ENST00000417412 665 ntBASIC15.16■□□□□ 0.02
BEST2Q8NFU1 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BEST2Q8NFU1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AC132825.4-202ENST00000578792 434 ntBASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 AP003419.4-201ENST00000616071 517 ntBASIC15.15■□□□□ 0.02
BEST2Q8NFU1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
BEST2Q8NFU1 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 MST1P2-201ENST00000457982 2291 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 Z69890.1-201ENST00000382990 339 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 AK2P2-201ENST00000439142 405 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 GRPEL2P1-201ENST00000453145 339 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 LDHBP1-201ENST00000455730 1119 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 RN7SL767P-201ENST00000493013 295 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.14■□□□□ 0.01
BEST2Q8NFU1 MIR4265-201ENST00000582152 99 ntBASIC15.14■□□□□ 0.01
BEST2Q8NFU1 AP000322.3-201ENST00000608665 388 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms