Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 AL451007.2-201ENST00000632004 563 ntBASIC21.59■■□□□ 1.05
VPS8Q8N3P4 PI4KAP2-201ENST00000360806 2080 ntBASIC21.59■■□□□ 1.05
VPS8Q8N3P4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
VPS8Q8N3P4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 AL136379.1-201ENST00000623471 2642 ntBASIC21.58■■□□□ 1.05
VPS8Q8N3P4 AC022080.1-201ENST00000366255 781 ntBASIC21.58■■□□□ 1.05
VPS8Q8N3P4 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 LINC00431-202ENST00000636375 159 ntBASIC21.58■■□□□ 1.05
VPS8Q8N3P4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VPS8Q8N3P4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS8Q8N3P4 AGAP12P-201ENST00000585227 2359 ntBASIC21.58■■□□□ 1.04
VPS8Q8N3P4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VPS8Q8N3P4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
VPS8Q8N3P4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC21.58■■□□□ 1.04
VPS8Q8N3P4 MAPT-IT1-201ENST00000624111 3016 ntBASIC21.58■■□□□ 1.04
VPS8Q8N3P4 CYP51A1P3-201ENST00000400072 1428 ntBASIC21.57■■□□□ 1.04
VPS8Q8N3P4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 SNU13-204ENST00000402458 462 ntTSL 3 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 SAA2-206ENST00000530400 323 ntTSL 3 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 GUCY2EP-203ENST00000531117 1918 ntBASIC21.57■■□□□ 1.04
VPS8Q8N3P4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 AL365181.3-201ENST00000605886 3222 ntBASIC21.57■■□□□ 1.04
VPS8Q8N3P4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 RHPN1-AS1-201ENST00000518049 1918 ntBASIC21.57■■□□□ 1.04
VPS8Q8N3P4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC21.57■■□□□ 1.04
VPS8Q8N3P4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 RPL10-203ENST00000406022 748 ntTSL 3 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC21.56■■□□□ 1.04
VPS8Q8N3P4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VPS8Q8N3P4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms