Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.62□□□□□ -0.23
RFTN2Q52LD8 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SCARNA21-201ENST00000517026 139 ntBASIC13.62□□□□□ -0.23
RFTN2Q52LD8 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 AL162274.1-201ENST00000617191 1098 ntBASIC13.62□□□□□ -0.23
RFTN2Q52LD8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFTN2Q52LD8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 AC018629.1-201ENST00000623381 1736 ntBASIC13.61□□□□□ -0.23
RFTN2Q52LD8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 AL355102.3-201ENST00000554299 1678 ntBASIC13.61□□□□□ -0.23
RFTN2Q52LD8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.61□□□□□ -0.23
RFTN2Q52LD8 XBP1P1-201ENST00000436573 652 ntBASIC13.61□□□□□ -0.23
RFTN2Q52LD8 AC234783.1-201ENST00000441761 496 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms