Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 PCDHB17P-202ENST00000623466 3066 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 RN7SKP175-201ENST00000408472 289 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 AL442647.2-201ENST00000429864 857 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CRB3P1-201ENST00000449338 276 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 COX20P2-201ENST00000452636 358 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 FTLP10-202ENST00000505798 471 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 KRT18P25-201ENST00000508931 1278 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 SLC7A15P-201ENST00000424028 1363 ntBASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
ANKRD55Q3KP44 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AP000593.2-201ENST00000542775 1433 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC098614.1-201ENST00000368528 745 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 TAF8-206ENST00000472818 719 ntTSL 2 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC011495.1-201ENST00000498085 584 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC068587.3-201ENST00000526613 355 ntBASIC11.78□□□□□ -0.52
ANKRD55Q3KP44 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms