Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 SPDYE19P-201ENST00000338590 713 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 TUBB2BP1-201ENST00000404155 871 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 SKA2-202ENST00000437036 625 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.97□□□□□ -0.49
SSBP1Q04837 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 CLUHP6-201ENST00000580789 941 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 AP001462.1-201ENST00000594089 452 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 MIR8072-201ENST00000614241 80 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SSBP1Q04837 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SSBP1Q04837 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 IL9RP3-201ENST00000442856 1674 ntBASIC11.97□□□□□ -0.49
SSBP1Q04837 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC11.97□□□□□ -0.49
SSBP1Q04837 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SSBP1Q04837 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.96□□□□□ -0.49
SSBP1Q04837 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 SLC7A15P-201ENST00000424028 1363 ntBASIC11.96□□□□□ -0.49
SSBP1Q04837 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 RPSAP43-201ENST00000402237 625 ntBASIC11.96□□□□□ -0.49
SSBP1Q04837 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.96□□□□□ -0.49
SSBP1Q04837 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.96□□□□□ -0.49
SSBP1Q04837 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.96□□□□□ -0.49
SSBP1Q04837 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.96□□□□□ -0.49
SSBP1Q04837 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.96□□□□□ -0.49
SSBP1Q04837 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SSBP1Q04837 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC11.96□□□□□ -0.49
SSBP1Q04837 AC140658.4-201ENST00000561990 352 ntBASIC11.96□□□□□ -0.49
SSBP1Q04837 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.96□□□□□ -0.49
SSBP1Q04837 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.96□□□□□ -0.49
SSBP1Q04837 TMEM261P1-201ENST00000604899 340 ntBASIC11.96□□□□□ -0.49
SSBP1Q04837 AC004790.1-201ENST00000612686 536 ntBASIC11.96□□□□□ -0.49
SSBP1Q04837 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SSBP1Q04837 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.96□□□□□ -0.5
SSBP1Q04837 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
SSBP1Q04837 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SSBP1Q04837 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.96□□□□□ -0.5
SSBP1Q04837 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SSBP1Q04837 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SSBP1Q04837 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SSBP1Q04837 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC11.95□□□□□ -0.5
SSBP1Q04837 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 AC012531.1-201ENST00000562848 2680 ntBASIC11.95□□□□□ -0.5
SSBP1Q04837 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms