Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.27■□□□□ 0.03
CDC42EP1Q00587 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42EP1Q00587 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42EP1Q00587 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42EP1Q00587 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC42EP1Q00587 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 AC093462.1-201ENST00000621167 1683 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 FAM45BP-202ENST00000592932 1624 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 GGTLC4P-201ENST00000402176 664 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 AC093826.1-201ENST00000508655 993 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MIR3940-201ENST00000579148 102 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 LINC00431-202ENST00000636375 159 ntBASIC15.26■□□□□ 0.03
CDC42EP1Q00587 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC42EP1Q00587 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 PSAT1P2-201ENST00000426107 972 ntBASIC15.25■□□□□ 0.03
CDC42EP1Q00587 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 MIR5196-201ENST00000578146 115 ntBASIC15.25■□□□□ 0.03
CDC42EP1Q00587 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 AC011471.3-201ENST00000623576 402 ntBASIC15.25■□□□□ 0.03
CDC42EP1Q00587 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDC42EP1Q00587 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms