Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 HNRNPA1P59-201ENST00000430583 918 ntBASIC16.46■□□□□ 0.23
CNTNAP1P78357 RPL29P2-201ENST00000488409 460 ntBASIC16.46■□□□□ 0.23
CNTNAP1P78357 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 MIR5193-201ENST00000584510 109 ntBASIC16.46■□□□□ 0.23
CNTNAP1P78357 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.46■□□□□ 0.23
CNTNAP1P78357 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CNTNAP1P78357 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTNAP1P78357 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.46■□□□□ 0.22
CNTNAP1P78357 AC020910.6-201ENST00000623084 1459 ntBASIC16.46■□□□□ 0.22
CNTNAP1P78357 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNTNAP1P78357 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNTNAP1P78357 AC140479.7-201ENST00000636301 2332 ntBASIC16.46■□□□□ 0.22
CNTNAP1P78357 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTNAP1P78357 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNTNAP1P78357 Z98885.3-201ENST00000624882 1757 ntBASIC16.45■□□□□ 0.22
CNTNAP1P78357 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 MIR632-201ENST00000385193 94 ntBASIC16.44■□□□□ 0.22
CNTNAP1P78357 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 KRT18P33-201ENST00000398525 1043 ntBASIC16.44■□□□□ 0.22
CNTNAP1P78357 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 AC004910.1-201ENST00000433493 787 ntBASIC16.44■□□□□ 0.22
CNTNAP1P78357 CCND3P1-201ENST00000438347 580 ntBASIC16.44■□□□□ 0.22
CNTNAP1P78357 YY1P2-201ENST00000438766 948 ntBASIC16.44■□□□□ 0.22
CNTNAP1P78357 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 PSME2P2-201ENST00000453033 700 ntBASIC16.44■□□□□ 0.22
CNTNAP1P78357 RNF7-205ENST00000480908 782 ntTSL 4 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
CNTNAP1P78357 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTNAP1P78357 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms