Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.23□□□□□ -0.45
ACTBP60709 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
ACTBP60709 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
ACTBP60709 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.23□□□□□ -0.45
ACTBP60709 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.23□□□□□ -0.45
ACTBP60709 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
ACTBP60709 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
ACTBP60709 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 ENPP7P5-201ENST00000541031 1031 ntBASIC12.23□□□□□ -0.45
ACTBP60709 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.23□□□□□ -0.45
ACTBP60709 AC004466.1-201ENST00000599515 1080 ntBASIC12.23□□□□□ -0.45
ACTBP60709 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 WFDC1-204ENST00000613603 549 ntBASIC12.23□□□□□ -0.45
ACTBP60709 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.23□□□□□ -0.45
ACTBP60709 CU634019.7-201ENST00000624153 1185 ntBASIC12.23□□□□□ -0.45
ACTBP60709 FP236241.2-201ENST00000624906 1185 ntBASIC12.23□□□□□ -0.45
ACTBP60709 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.23□□□□□ -0.45
ACTBP60709 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 AC002472.3-201ENST00000640124 621 ntBASIC12.23□□□□□ -0.45
ACTBP60709 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
ACTBP60709 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 AL022323.5-201ENST00000624101 2059 ntBASIC12.23□□□□□ -0.45
ACTBP60709 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.23□□□□□ -0.45
ACTBP60709 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
ACTBP60709 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.22□□□□□ -0.45
ACTBP60709 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 AL358781.1-202ENST00000321081 1360 ntBASIC12.22□□□□□ -0.45
ACTBP60709 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.22□□□□□ -0.45
ACTBP60709 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.22□□□□□ -0.45
ACTBP60709 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.22□□□□□ -0.45
ACTBP60709 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ACTBP60709 KRT18P25-201ENST00000508931 1278 ntBASIC12.22□□□□□ -0.45
ACTBP60709 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
ACTBP60709 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.22□□□□□ -0.45
ACTBP60709 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.22□□□□□ -0.45
ACTBP60709 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.22□□□□□ -0.45
ACTBP60709 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.22□□□□□ -0.45
ACTBP60709 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.22□□□□□ -0.45
ACTBP60709 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 AC027307.3-201ENST00000594262 1100 ntBASIC12.22□□□□□ -0.45
ACTBP60709 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.22□□□□□ -0.45
ACTBP60709 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.22□□□□□ -0.45
ACTBP60709 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.22□□□□□ -0.45
ACTBP60709 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.22□□□□□ -0.45
ACTBP60709 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ACTBP60709 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ACTBP60709 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.22□□□□□ -0.45
ACTBP60709 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms