Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
WNT3AP56704 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
WNT3AP56704 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.27□□□□□ -0.12
WNT3AP56704 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.27□□□□□ -0.12
WNT3AP56704 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
WNT3AP56704 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.27□□□□□ -0.12
WNT3AP56704 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3AP56704 AC006987.1-201ENST00000413610 527 ntBASIC14.27□□□□□ -0.13
WNT3AP56704 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.27□□□□□ -0.13
WNT3AP56704 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3AP56704 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.27□□□□□ -0.13
WNT3AP56704 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.27□□□□□ -0.13
WNT3AP56704 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3AP56704 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3AP56704 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3AP56704 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3AP56704 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3AP56704 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.27□□□□□ -0.13
WNT3AP56704 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.27□□□□□ -0.13
WNT3AP56704 GPR182-203ENST00000622922 591 ntBASIC14.27□□□□□ -0.13
WNT3AP56704 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.27□□□□□ -0.13
WNT3AP56704 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
WNT3AP56704 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
WNT3AP56704 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
WNT3AP56704 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 SALL4P6-201ENST00000429385 1691 ntBASIC14.26□□□□□ -0.13
WNT3AP56704 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.26□□□□□ -0.13
WNT3AP56704 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.26□□□□□ -0.13
WNT3AP56704 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.26□□□□□ -0.13
WNT3AP56704 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3AP56704 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3AP56704 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
WNT3AP56704 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 BX679664.3-201ENST00000414070 555 ntBASIC14.26□□□□□ -0.13
WNT3AP56704 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.26□□□□□ -0.13
WNT3AP56704 AC113935.1-201ENST00000471722 555 ntBASIC14.26□□□□□ -0.13
WNT3AP56704 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
WNT3AP56704 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.26□□□□□ -0.13
WNT3AP56704 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3AP56704 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
WNT3AP56704 MIR4525-201ENST00000580000 75 ntBASIC14.26□□□□□ -0.13
WNT3AP56704 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.26□□□□□ -0.13
WNT3AP56704 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 AC005014.1-201ENST00000432006 2976 ntBASIC14.26□□□□□ -0.13
WNT3AP56704 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.26□□□□□ -0.13
WNT3AP56704 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 FMO6P-201ENST00000236166 1620 ntBASIC14.26□□□□□ -0.13
WNT3AP56704 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.26□□□□□ -0.13
WNT3AP56704 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
WNT3AP56704 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
WNT3AP56704 MEX3B-202ENST00000558133 4333 ntBASIC14.25□□□□□ -0.13
WNT3AP56704 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms