Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.22□□□□□ -0.29
PER3P56645 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.22□□□□□ -0.29
PER3P56645 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 AC078875.1-201ENST00000431907 724 ntBASIC13.22□□□□□ -0.29
PER3P56645 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.22□□□□□ -0.29
PER3P56645 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.22□□□□□ -0.29
PER3P56645 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
PER3P56645 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.22□□□□□ -0.29
PER3P56645 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 AC087392.5-201ENST00000612517 489 ntBASIC13.22□□□□□ -0.29
PER3P56645 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
PER3P56645 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 AC023090.2-201ENST00000625182 2110 ntBASIC13.22□□□□□ -0.29
PER3P56645 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 KRT8P21-201ENST00000430398 1491 ntBASIC13.22□□□□□ -0.29
PER3P56645 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PER3P56645 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.22□□□□□ -0.29
PER3P56645 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
PER3P56645 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
PER3P56645 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.21□□□□□ -0.29
PER3P56645 AC113367.3-201ENST00000508316 1912 ntBASIC13.21□□□□□ -0.29
PER3P56645 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.21□□□□□ -0.29
PER3P56645 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.21□□□□□ -0.29
PER3P56645 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.21□□□□□ -0.29
PER3P56645 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.21□□□□□ -0.29
PER3P56645 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PER3P56645 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.21□□□□□ -0.29
PER3P56645 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.21□□□□□ -0.29
PER3P56645 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PER3P56645 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms