Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN5P54829 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN5P54829 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PTPN5P54829 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN5P54829 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN5P54829 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN5P54829 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.68□□□□□ -0.06
PTPN5P54829 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PTPN5P54829 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN5P54829 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PTPN5P54829 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.68□□□□□ -0.06
PTPN5P54829 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTPN5P54829 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN5P54829 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTPN5P54829 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTPN5P54829 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTPN5P54829 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC14.67□□□□□ -0.06
PTPN5P54829 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.67□□□□□ -0.06
PTPN5P54829 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
PTPN5P54829 AC008026.2-201ENST00000495438 348 ntBASIC14.67□□□□□ -0.06
PTPN5P54829 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PTPN5P54829 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 FBXO36P1-201ENST00000579006 471 ntBASIC14.67□□□□□ -0.06
PTPN5P54829 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.67□□□□□ -0.06
PTPN5P54829 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN5P54829 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN5P54829 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PTPN5P54829 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN5P54829 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN5P54829 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN5P54829 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN5P54829 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PTPN5P54829 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 CYP4F23P-201ENST00000593402 1579 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
PTPN5P54829 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN5P54829 SORD2P-201ENST00000558556 1069 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN5P54829 AC142086.5-202ENST00000562500 217 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 AC084262.1-201ENST00000567818 751 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN5P54829 AL118522.1-201ENST00000611368 560 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 AL512324.3-201ENST00000619383 882 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 AC097520.1-201ENST00000624435 385 ntBASIC14.66□□□□□ -0.06
PTPN5P54829 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN5P54829 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN5P54829 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN5P54829 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTPN5P54829 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms