Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MFSD12-215ENST00000615613 688 ntBASIC17.02■□□□□ 0.31
NUP98P52948 AC106782.5-201ENST00000616011 337 ntBASIC17.02■□□□□ 0.31
NUP98P52948 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
NUP98P52948 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC17.02■□□□□ 0.31
NUP98P52948 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC17.02■□□□□ 0.31
NUP98P52948 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NUP98P52948 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.02■□□□□ 0.31
NUP98P52948 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
NUP98P52948 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NUP98P52948 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.01■□□□□ 0.31
NUP98P52948 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.01■□□□□ 0.31
NUP98P52948 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
NUP98P52948 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC17.01■□□□□ 0.31
NUP98P52948 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.01■□□□□ 0.31
NUP98P52948 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC17.01■□□□□ 0.31
NUP98P52948 AC048382.6-201ENST00000621980 1223 ntBASIC17.01■□□□□ 0.31
NUP98P52948 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 NME1-209ENST00000511355 1645 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 AL050341.2-201ENST00000567508 1541 ntBASIC17.01■□□□□ 0.31
NUP98P52948 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC17.01■□□□□ 0.31
NUP98P52948 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
NUP98P52948 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NUP98P52948 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NUP98P52948 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
NUP98P52948 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NUP98P52948 AP002414.2-201ENST00000591780 3365 ntBASIC17■□□□□ 0.31
NUP98P52948 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC17■□□□□ 0.31
NUP98P52948 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
NUP98P52948 ALG1L15P-201ENST00000482834 794 ntBASIC17■□□□□ 0.31
NUP98P52948 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17■□□□□ 0.31
NUP98P52948 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
NUP98P52948 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NUP98P52948 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 LINC02228-204ENST00000642115 2962 ntBASIC17■□□□□ 0.31
NUP98P52948 AC091807.1-201ENST00000418838 1544 ntBASIC17■□□□□ 0.31
NUP98P52948 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
NUP98P52948 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 AC027601.5-201ENST00000624065 2482 ntBASIC17■□□□□ 0.31
NUP98P52948 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NUP98P52948 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
NUP98P52948 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NUP98P52948 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 CCL19-202ENST00000378800 414 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17■□□□□ 0.31
NUP98P52948 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC17■□□□□ 0.31
NUP98P52948 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17■□□□□ 0.31
NUP98P52948 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17■□□□□ 0.31
NUP98P52948 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC17■□□□□ 0.31
NUP98P52948 GRAMD4P6-201ENST00000556999 244 ntBASIC17■□□□□ 0.31
NUP98P52948 MIR4254-201ENST00000581063 76 ntBASIC17■□□□□ 0.31
NUP98P52948 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC17■□□□□ 0.31
NUP98P52948 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NUP98P52948 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms