Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCC3P46736 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
BRCC3P46736 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
BRCC3P46736 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCC3P46736 AC090643.2-201ENST00000623442 2029 ntBASIC14.95□□□□□ -0.02
BRCC3P46736 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
BRCC3P46736 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.95□□□□□ -0.02
BRCC3P46736 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 AC023908.3-201ENST00000564211 3047 ntBASIC14.95□□□□□ -0.02
BRCC3P46736 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRCC3P46736 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.95□□□□□ -0.02
BRCC3P46736 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
BRCC3P46736 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 AC097065.1-201ENST00000425737 517 ntBASIC14.94□□□□□ -0.02
BRCC3P46736 AC114501.1-201ENST00000445949 172 ntBASIC14.94□□□□□ -0.02
BRCC3P46736 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.94□□□□□ -0.02
BRCC3P46736 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.94□□□□□ -0.02
BRCC3P46736 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 AC026410.1-201ENST00000507366 1101 ntBASIC14.94□□□□□ -0.02
BRCC3P46736 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.94□□□□□ -0.02
BRCC3P46736 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.94□□□□□ -0.02
BRCC3P46736 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.94□□□□□ -0.02
BRCC3P46736 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
BRCC3P46736 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.94□□□□□ -0.02
BRCC3P46736 AC138466.5-201ENST00000624002 808 ntBASIC14.94□□□□□ -0.02
BRCC3P46736 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
BRCC3P46736 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.94□□□□□ -0.02
BRCC3P46736 RCC2P1-201ENST00000452257 1476 ntBASIC14.94□□□□□ -0.02
BRCC3P46736 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.94□□□□□ -0.02
BRCC3P46736 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
BRCC3P46736 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRCC3P46736 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
BRCC3P46736 AC027601.5-201ENST00000624065 2482 ntBASIC14.93□□□□□ -0.02
BRCC3P46736 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.93□□□□□ -0.02
BRCC3P46736 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
BRCC3P46736 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.93□□□□□ -0.02
BRCC3P46736 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.93□□□□□ -0.02
BRCC3P46736 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
BRCC3P46736 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.93□□□□□ -0.02
BRCC3P46736 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.93□□□□□ -0.02
BRCC3P46736 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.93□□□□□ -0.02
BRCC3P46736 RN7SL23P-201ENST00000484055 275 ntBASIC14.93□□□□□ -0.02
BRCC3P46736 ALG1L6P-201ENST00000515248 758 ntBASIC14.93□□□□□ -0.02
BRCC3P46736 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.93□□□□□ -0.02
BRCC3P46736 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.93□□□□□ -0.02
BRCC3P46736 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 AL049840.2-201ENST00000602722 535 ntBASIC14.93□□□□□ -0.02
BRCC3P46736 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.93□□□□□ -0.02
BRCC3P46736 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRCC3P46736 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms