Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 AC100850.1-201ENST00000506768 649 ntBASIC15.17■□□□□ 0.02
SSR1P43307 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.17■□□□□ 0.02
SSR1P43307 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.17■□□□□ 0.02
SSR1P43307 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.17■□□□□ 0.02
SSR1P43307 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.17■□□□□ 0.02
SSR1P43307 AL512343.1-201ENST00000605837 169 ntBASIC15.17■□□□□ 0.02
SSR1P43307 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 AC104506.1-201ENST00000609247 429 ntBASIC15.17■□□□□ 0.02
SSR1P43307 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.17■□□□□ 0.02
SSR1P43307 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
SSR1P43307 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SSR1P43307 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.17■□□□□ 0.02
SSR1P43307 AL008718.2-201ENST00000609206 1313 ntBASIC15.17■□□□□ 0.02
SSR1P43307 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SSR1P43307 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.16■□□□□ 0.02
SSR1P43307 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 AC104989.1-201ENST00000519711 778 ntBASIC15.16■□□□□ 0.02
SSR1P43307 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.16■□□□□ 0.02
SSR1P43307 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SSR1P43307 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 AC100827.2-201ENST00000563214 1194 ntBASIC15.16■□□□□ 0.02
SSR1P43307 MIR4741-201ENST00000579822 90 ntBASIC15.16■□□□□ 0.02
SSR1P43307 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 AC132192.2-201ENST00000596206 1147 ntBASIC15.16■□□□□ 0.02
SSR1P43307 LINC02084-201ENST00000606069 1096 ntBASIC15.16■□□□□ 0.02
SSR1P43307 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SSR1P43307 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SSR1P43307 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SSR1P43307 AC244394.1-201ENST00000435000 1665 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms