Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FDFT1P37268 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
FDFT1P37268 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
FDFT1P37268 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 AGAP12P-201ENST00000585227 2359 ntBASIC14.44□□□□□ -0.1
FDFT1P37268 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.44□□□□□ -0.1
FDFT1P37268 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.44□□□□□ -0.1
FDFT1P37268 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.44□□□□□ -0.1
FDFT1P37268 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.44□□□□□ -0.1
FDFT1P37268 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.44□□□□□ -0.1
FDFT1P37268 AC011742.3-201ENST00000439053 820 ntBASIC14.44□□□□□ -0.1
FDFT1P37268 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.44□□□□□ -0.1
FDFT1P37268 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.44□□□□□ -0.1
FDFT1P37268 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.44□□□□□ -0.1
FDFT1P37268 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.44□□□□□ -0.1
FDFT1P37268 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.44□□□□□ -0.1
FDFT1P37268 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.44□□□□□ -0.1
FDFT1P37268 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 AC007663.3-201ENST00000609632 465 ntBASIC14.44□□□□□ -0.1
FDFT1P37268 AC068587.8-201ENST00000641239 219 ntBASIC14.44□□□□□ -0.1
FDFT1P37268 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.44□□□□□ -0.1
FDFT1P37268 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
FDFT1P37268 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FDFT1P37268 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FDFT1P37268 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 MEX3B-202ENST00000558133 4333 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 AC019294.4-201ENST00000561777 2905 ntBASIC14.43□□□□□ -0.1
FDFT1P37268 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
FDFT1P37268 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.43□□□□□ -0.1
FDFT1P37268 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FDFT1P37268 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.43□□□□□ -0.1
FDFT1P37268 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
FDFT1P37268 SNORA50C-201ENST00000408535 133 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms