Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC089987.1-201ENST00000551654 2209 ntBASIC12.35□□□□□ -0.43
CCL2P13500 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL2P13500 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL2P13500 OR8T1P-201ENST00000421347 918 ntBASIC12.35□□□□□ -0.43
CCL2P13500 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 AC024681.1-201ENST00000521917 487 ntBASIC12.35□□□□□ -0.43
CCL2P13500 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CCL2P13500 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC12.35□□□□□ -0.43
CCL2P13500 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 AL109837.1-201ENST00000603272 613 ntBASIC12.35□□□□□ -0.43
CCL2P13500 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 AL139099.5-201ENST00000635274 300 ntBASIC12.35□□□□□ -0.43
CCL2P13500 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCL2P13500 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCL2P13500 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CCL2P13500 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 AL590824.1-201ENST00000403828 1349 ntBASIC12.35□□□□□ -0.43
CCL2P13500 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.35□□□□□ -0.43
CCL2P13500 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CCL2P13500 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.35□□□□□ -0.43
CCL2P13500 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 CICP4-201ENST00000447359 2812 ntBASIC12.34□□□□□ -0.43
CCL2P13500 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 AC130686.1-201ENST00000622936 2466 ntBASIC12.34□□□□□ -0.43
CCL2P13500 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 FAM90A12P-201ENST00000519497 2375 ntBASIC12.34□□□□□ -0.43
CCL2P13500 FAM90A24P-201ENST00000520792 2369 ntBASIC12.34□□□□□ -0.43
CCL2P13500 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CCL2P13500 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 KRT17P5-201ENST00000332088 839 ntBASIC12.34□□□□□ -0.43
CCL2P13500 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCL2P13500 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCL2P13500 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL2P13500 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL2P13500 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.34□□□□□ -0.43
CCL2P13500 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
CCL2P13500 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 POU5F1P2-201ENST00000521750 823 ntBASIC12.34□□□□□ -0.43
CCL2P13500 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.34□□□□□ -0.43
CCL2P13500 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CCL2P13500 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms